Introducing MRI: Spatial Localization and k-space: Review and Q&A (25 of 56)

00:41:34
https://www.youtube.com/watch?v=WwAbCGIJwIk

Ringkasan

TLDRThe video focuses on spatial localization in MRI and the organization of k-space, explaining the significance of dividing k-space into quadrants for conjugate symmetry. It introduces techniques for acquisition, particularly focusing on half Fourier acquisition to save time. The discussion extends to slice selection and the concept of frequency encoding and phase encoding, highlighting their roles in obtaining accurate spatial information. The impact of varying gradient strengths on signal quality is addressed, emphasizing the necessity of collecting multiple samples for effective Fourier transformation and image reconstruction.

Takeaways

  • 🔍 Understanding k-space quadrants enhances image acquisition efficiency.
  • ⏳ Half Fourier acquisition can reduce time but may affect image quality.
  • 📏 Slice selection is critical for localizing signals in MRI.
  • 🎛 Frequency encoding helps differentiate signal frequencies based on magnetic field strength.
  • 🌀 Phase encoding allows for spatial localization in the second dimension of the image.
  • 🎞 Multiple samples are essential for accurate image reconstruction.
  • ⚠️ Stronger gradients can introduce more def phasing, affecting image quality.
  • 🔄 The Fourier transform is crucial for decoding the acquired MRI signals.
  • ❓ Issues with Fourier transforms can lead to artifacts in the image.
  • 🔧 Simultaneous application of both encoding gradients complicates data acquisition.

Garis waktu

  • 00:00:00 - 00:05:00

    The discussion begins with spatial localization in k-space, emphasizing the concept of dividing k-space into quadrants and the implications of conjugate symmetry. It highlights that while acquiring only a portion of k-space can save time, it may lead to reduced image quality due to inherent variabilities and noise in data collection.

  • 00:05:00 - 00:10:00

    The importance of slice selection is introduced, explaining how signals from a selected slice are localized in the frequency direction. The speaker clarifies that frequency encoding can be applied in either direction, and the choice depends on the body part being imaged.

  • 00:10:00 - 00:15:00

    The process of frequency encoding is detailed, explaining how different spins in a slice resonate at different frequencies due to variations in magnetic field strength. The speaker emphasizes that the detected signal is a composite of these different frequencies, which can be sampled over time to gather information about the entire slice.

  • 00:15:00 - 00:20:00

    The discussion continues with the concept of sampling the signal and how each sample contains information from the entire slice. The speaker explains that while it may seem possible to tune into individual frequencies, the practical approach is to sample the entire signal and then use a Fourier transform to separate the frequencies.

  • 00:20:00 - 00:25:00

    The speaker introduces the Fourier transform as a method to analyze the sampled signal, allowing for the localization of signal along one dimension of the image. However, they note that this only provides information in one direction, necessitating the use of phase encoding for the second dimension.

  • 00:25:00 - 00:30:00

    Phase encoding is explained as a method to determine the location of signals in the top-to-bottom direction of the image. The speaker describes how applying a phase encoding gradient during signal acquisition allows for the differentiation of signals based on their phase changes, which correlate with their spatial locations.

  • 00:30:00 - 00:35:00

    The necessity of acquiring multiple samples for both frequency and phase encoding is emphasized. The speaker explains that each repetition of the imaging process involves both types of encoding, but they must be done sequentially to gather sufficient data for accurate image reconstruction.

  • 00:35:00 - 00:41:34

    Finally, the speaker addresses questions about the relationship between phase encoding and signal intensity, clarifying that stronger gradients lead to greater defacing and thus less signal amplitude. The arrangement of phase encoding gradients is discussed, noting that weaker gradients are typically at the center of k-space, while stronger gradients are at the periphery.

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Peta Pikiran

Video Tanya Jawab

  • What is the benefit of half Fourier acquisition?

    Half Fourier acquisition can save time but may result in lower image quality due to errors in reconstructing data.

  • How does slice selection work in MRI?

    Slice selection involves exciting a specific slice of tissue to localize the signal from that slice.

  • What is frequency encoding?

    Frequency encoding uses a magnetic field gradient to discriminate signals based on their frequency, allowing for spatial localization.

  • What role does phase encoding play?

    Phase encoding provides localization in the second dimension of the image, using varying gradient strengths for sampling.

  • Why do we acquire multiple samples?

    Multiple samples are necessary to provide enough information for accurate Fourier transformation and image reconstruction.

  • How is image quality affected by gradient strength?

    Stronger gradients can lead to more def phasing, which reduces signal amplitude and image quality.

  • What issues could arise from Fourier transforms?

    Fourier transform artifacts can arise from data issues or processing errors, leading to image distortions.

  • Why can't both frequency and phase encoding gradients be applied simultaneously?

    Applying them simultaneously creates a complex gradient field that complicates the sampling process and does not allow for the necessary multiple samples.

  • What does the central signal intensity indicate in phase encoding?

    The central signal intensity represents the lowest phase encoding gradients, resulting in less def phasing and higher signal amplitude.

  • How does gradient strength affect signal processing in MRI?

    Higher gradient strength leads to greater differentiation in precessional frequencies, which results in more def phasing and reduced signal amplitude.

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Teks
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Gulir Otomatis:
  • 00:00:07
    any questions
  • 00:00:09
    about spatial
  • 00:00:17
    localization um so do you just image the
  • 00:00:22
    quter of kpace if it's you can get all
  • 00:00:24
    your same
  • 00:00:26
    information why would you why would you
  • 00:00:29
    all
  • 00:00:31
    well two things first of all so what
  • 00:00:33
    you're what what we're talking about
  • 00:00:36
    here
  • 00:00:40
    is that if we
  • 00:00:42
    divide our
  • 00:00:47
    kpace into four quadrants okay H this
  • 00:00:52
    this question oh same question see that
  • 00:00:54
    imagine that so that if we divide this
  • 00:00:57
    into four quadrants like this
  • 00:01:00
    that there is this conjugate
  • 00:01:04
    symmetry
  • 00:01:06
    okay so if I have the top half of kpace
  • 00:01:11
    I
  • 00:01:13
    can
  • 00:01:21
    right I can reproduce the
  • 00:01:24
    bottom or if I have the left half I can
  • 00:01:27
    reproduce the right half it's not not
  • 00:01:30
    one thing you said is not true if you
  • 00:01:32
    have
  • 00:01:34
    25% you can't do
  • 00:01:36
    anything okay because it's not mirror
  • 00:01:40
    symmetry right so if you have this 25%
  • 00:01:44
    all you can do is generate the lower
  • 00:01:47
    right
  • 00:01:48
    25% so let's understand that first now
  • 00:01:52
    that being said so in terms of if Time
  • 00:01:56
    Savings is the reason why you're doing
  • 00:01:58
    this we in a second we talk about
  • 00:02:00
    another reason why you might do do this
  • 00:02:02
    if you're interested in Saving Time you
  • 00:02:04
    would be interested in acquiring only
  • 00:02:06
    the first 50% in terms of the number of
  • 00:02:09
    rows in
  • 00:02:10
    kpace right so if you can do that right
  • 00:02:14
    if you can do it in half the time why
  • 00:02:17
    would you ever bother to acquire the
  • 00:02:20
    whole
  • 00:02:22
    thing okay so everyone hear the
  • 00:02:24
    question okay so the
  • 00:02:28
    reason is that while it's true that you
  • 00:02:32
    can do what is called
  • 00:02:38
    a half fora acquisition
  • 00:02:42
    sometimes uh there are other names that
  • 00:02:44
    different vendors use for it but if you
  • 00:02:47
    only acquire that fir it's actually not
  • 00:02:49
    just the first half it's the first half
  • 00:02:50
    plus at least the first line of the
  • 00:02:52
    second half that you can what we call
  • 00:02:56
    interpolate the second half of kpace
  • 00:03:00
    but in re while in theory it would be
  • 00:03:03
    possible to actually reproduce it right
  • 00:03:06
    in reality because of right
  • 00:03:10
    variabilities that are inherent in the
  • 00:03:11
    way that we collect the data and noise
  • 00:03:15
    there are always going to be some errors
  • 00:03:17
    in reproducing that second half so the
  • 00:03:20
    image quality and in particular the
  • 00:03:22
    signal to noise of the image is never
  • 00:03:24
    going to be quite the same when you take
  • 00:03:27
    this approach now that being said it's
  • 00:03:30
    it's pretty good so this is a technique
  • 00:03:33
    that you would use where you really need
  • 00:03:35
    the time so in other words if you're
  • 00:03:38
    doing something like breath hold Imaging
  • 00:03:40
    or if you're trying to image something
  • 00:03:43
    for example in in some applications in
  • 00:03:46
    diffusion Imaging where any kind of
  • 00:03:49
    motion uh even physiologic motion is
  • 00:03:52
    going to limit your ability to get a
  • 00:03:54
    diagnostic quality image then it's an
  • 00:03:58
    option and you really need to exercise
  • 00:04:01
    that option but if you have the
  • 00:04:03
    opportunity to acquire a complete data
  • 00:04:05
    set your image quality is going to be
  • 00:04:07
    better
  • 00:04:10
    yeah okay so any questions about slice
  • 00:04:18
    selection from this
  • 00:04:20
    morning is everyone okay with that how
  • 00:04:23
    we select a
  • 00:04:25
    slice determine orientation location
  • 00:04:31
    thickness yes
  • 00:04:34
    no
  • 00:04:36
    okay now once we have our slice
  • 00:04:40
    selected and we talked about localizing
  • 00:04:44
    signal in the frequency
  • 00:04:47
    direction is everyone clear about how we
  • 00:04:49
    do
  • 00:04:52
    that Smitha what do you
  • 00:04:56
    say um not Crystal not Crystal
  • 00:05:01
    okay
  • 00:05:03
    so but slice selection we're okay with
  • 00:05:06
    pistol okay
  • 00:05:10
    so
  • 00:05:13
    so slice selection simply means that we
  • 00:05:17
    have a signal that comes from everywhere
  • 00:05:19
    in this slice and we have no idea where
  • 00:05:21
    it comes from okay when we talk about
  • 00:05:25
    frequency
  • 00:05:27
    encoding we turn on a gr magnetic
  • 00:05:31
    field parallel to one of the inplane
  • 00:05:33
    dimensions of the slice and by the way
  • 00:05:35
    to be clear I've always been showing you
  • 00:05:37
    frequency coding left to right and
  • 00:05:39
    phasing coding top to bottom it could be
  • 00:05:42
    the other way around it's totally your
  • 00:05:45
    choice uh we'll talk hopefully a little
  • 00:05:48
    bit about why you might make one choice
  • 00:05:50
    or the other depending on the body part
  • 00:05:52
    and the orientation of the image but it
  • 00:05:53
    could be either one so just to make the
  • 00:05:56
    diagram easy I've chosen left to right
  • 00:05:59
    so what what does this mean that we've
  • 00:06:00
    turned that that we've drawn this
  • 00:06:03
    oblique Arrow here I'm just causing a
  • 00:06:06
    gradient along that which means that if
  • 00:06:08
    we compare what's going on in the tissue
  • 00:06:11
    at each of a variety of locations along
  • 00:06:13
    this Dimension what's changing as we
  • 00:06:16
    move from left to
  • 00:06:19
    right it's not really left to right well
  • 00:06:23
    no it is left or right this is the this
  • 00:06:24
    is the image okay okay so if I say let's
  • 00:06:29
    look at all of the tissue within this
  • 00:06:33
    column okay and let's compare that to
  • 00:06:38
    all of the tissue
  • 00:06:40
    in this
  • 00:06:43
    column when I turn on this gradient
  • 00:06:46
    magnetic field what does that mean
  • 00:06:48
    what's a different exactly so the
  • 00:06:51
    magnetic field strength at each of these
  • 00:06:53
    locations is different now at a given
  • 00:06:56
    location like right here no matter where
  • 00:06:59
    you are top to bottom the field strength
  • 00:07:02
    is the same now since we've altered the
  • 00:07:05
    field strength between these two
  • 00:07:06
    locations it follows that these spins at
  • 00:07:09
    these two locations press at different
  • 00:07:12
    frequencies okay so the way this is
  • 00:07:17
    happening is that we turn on our RF with
  • 00:07:22
    our slice select
  • 00:07:23
    gradient right and at that point we have
  • 00:07:27
    transverse magnetization coming coming
  • 00:07:29
    from everything in this
  • 00:07:31
    slice okay so at this point in time we
  • 00:07:35
    have a signal right which we could
  • 00:07:39
    measure which is the composite of all of
  • 00:07:43
    the transverse magnetization in the
  • 00:07:45
    slice
  • 00:07:46
    okay and everything in the slice
  • 00:07:50
    beginning at this point in time is
  • 00:07:52
    pressing at what
  • 00:07:54
    frequency I haven't turned this on yet
  • 00:07:57
    so it be zero everything is pressing at
  • 00:07:59
    the same same frequency at Omega no
  • 00:08:02
    right now at some point in time we are
  • 00:08:05
    going to turn
  • 00:08:06
    on this frequency encoding gradient okay
  • 00:08:11
    and while that's on we're going to be
  • 00:08:13
    sampling this signal now as soon as we
  • 00:08:16
    turn it
  • 00:08:18
    on this signal is now composed of
  • 00:08:22
    what different groups of
  • 00:08:25
    spins that are seeing different field
  • 00:08:28
    strengths ande assessing at different
  • 00:08:31
    frequencies so essentially this signal
  • 00:08:34
    which we detect as a single signal
  • 00:08:36
    coming from the whole slice is really
  • 00:08:39
    the
  • 00:08:40
    sum right
  • 00:08:43
    of two different
  • 00:08:50
    components okay
  • 00:08:52
    okay so all we can detect is one signal
  • 00:08:56
    coming out of there but that signal
  • 00:08:59
    which which we detect at te because the
  • 00:09:01
    frequency encoding gradient is on is
  • 00:09:04
    composed of different I'm only showing
  • 00:09:05
    you two of them here but there's an
  • 00:09:07
    infinite array of different frequencies
  • 00:09:09
    because depending on location there is a
  • 00:09:13
    different field strength experienced by
  • 00:09:15
    those
  • 00:09:16
    spins right so when we sample this
  • 00:09:20
    signal it really contains all of these
  • 00:09:23
    components in
  • 00:09:24
    it by taking that signal and sampling it
  • 00:09:30
    right over
  • 00:09:34
    time measuring a whole bunch of
  • 00:09:38
    incremental measurements of signal
  • 00:09:39
    amplitude acquired at different points
  • 00:09:41
    in
  • 00:09:42
    time right which we can write those
  • 00:09:47
    down so we can
  • 00:09:50
    record over a period of
  • 00:09:53
    time right a series of measurements of
  • 00:09:56
    signal amplitude now each one of these
  • 00:09:59
    measurements of signal
  • 00:10:01
    amplitude
  • 00:10:03
    contains all of this
  • 00:10:06
    information right contain signal coming
  • 00:10:08
    from
  • 00:10:12
    where each one each time I measure this
  • 00:10:14
    where is that signal coming
  • 00:10:21
    from I mean it's coming along
  • 00:10:23
    each well it's coming from the entire
  • 00:10:27
    slice do you see why that that
  • 00:10:30
    is because remember we turn on our RF
  • 00:10:34
    and we generate transverse magnetization
  • 00:10:37
    from all the spins in that entire slice
  • 00:10:40
    they all have transverse magnetization
  • 00:10:42
    at this point and then we're waiting and
  • 00:10:45
    over here we're going to sample whatever
  • 00:10:46
    signal happens to be around well that
  • 00:10:49
    signal comes from the entire
  • 00:10:53
    slice so each time I sample this signal
  • 00:10:57
    each sample contains information coming
  • 00:10:59
    from the entire
  • 00:11:04
    slice you see why that is kind of but
  • 00:11:07
    once you once you add the the frequency
  • 00:11:10
    gradient don't can't you only sample
  • 00:11:13
    from where they're resonating at the the
  • 00:11:16
    more frequency or whatever okay so what
  • 00:11:19
    what you're asking is that well if I
  • 00:11:22
    turn on this frequency encoding gradient
  • 00:11:26
    all of a sudden spins press at different
  • 00:11:28
    frequencies depending on their
  • 00:11:31
    location so maybe we could be like a
  • 00:11:35
    little ham radio guy right and we could
  • 00:11:37
    tune in on individual frequencies and we
  • 00:11:41
    could measure the amplitude of the
  • 00:11:43
    signal at specific individual
  • 00:11:47
    frequencies you could try to do that
  • 00:11:50
    right but your ability to resolve at any
  • 00:11:54
    kind of a useful spatial resolution what
  • 00:11:58
    was going on at each of these locations
  • 00:12:00
    would be very difficult because remember
  • 00:12:02
    all you would be doing in that
  • 00:12:04
    case you're really doing the same thing
  • 00:12:07
    you're taking this big signal which is
  • 00:12:10
    composed of a whole bunch of different
  • 00:12:12
    frequencies and you're saying let's only
  • 00:12:14
    listen to one of them okay so what we're
  • 00:12:18
    doing instead is we're saying let's
  • 00:12:20
    sample the whole
  • 00:12:22
    signal listening to the whole
  • 00:12:24
    signal and let's then under put it
  • 00:12:28
    through a process
  • 00:12:29
    that will be able to tell us what each
  • 00:12:31
    of those frequencies are without us
  • 00:12:34
    having to go in and try and listen to
  • 00:12:36
    them individually okay which probably
  • 00:12:38
    wouldn't be physically possible to do
  • 00:12:41
    anyway do you hear the difference so
  • 00:12:44
    within this signal there are many
  • 00:12:46
    different
  • 00:12:47
    components right each processing at a
  • 00:12:50
    different frequency and in some sense
  • 00:12:52
    you could say you know just like when
  • 00:12:53
    you're driving your car home tonight
  • 00:12:55
    there's a whole bunch of frequencies out
  • 00:12:57
    there and you can tune your radio in
  • 00:13:00
    so that its sensitivity is limited to a
  • 00:13:03
    specific frequency so theoretically you
  • 00:13:06
    could think about doing that here with
  • 00:13:08
    the types of ranges of frequencies that
  • 00:13:10
    we're talking about it's just not going
  • 00:13:11
    to be it's not going to be possible so
  • 00:13:14
    instead we sample the entire signal
  • 00:13:17
    every time we sample it we're open to
  • 00:13:20
    everything that's in here so each sample
  • 00:13:22
    contains some of each of these
  • 00:13:25
    frequencies and each of those component
  • 00:13:28
    frequencies of course has some amplitude
  • 00:13:30
    that goes with it so do you see how the
  • 00:13:33
    spatially differentiated information is
  • 00:13:35
    embedded in each of these samples yes
  • 00:13:38
    okay I don't know how it pulls it apart
  • 00:13:39
    but I okay well at this
  • 00:13:42
    point if we take this and we put it
  • 00:13:45
    through the 4A transform and don't worry
  • 00:13:47
    about how it does it
  • 00:13:51
    okay just think of this as a black box
  • 00:13:55
    okay
  • 00:13:57
    really um
  • 00:14:02
    because in terms of what's going to be
  • 00:14:03
    useful to you in using this information
  • 00:14:05
    to understand the images we're going to
  • 00:14:07
    generate it's not going to make a
  • 00:14:09
    difference it really won't make a
  • 00:14:11
    difference whether you understand what
  • 00:14:13
    happens during this phase any more or
  • 00:14:16
    less but understanding what happens as
  • 00:14:20
    opposed to how it actually happens is is
  • 00:14:23
    going to be useful and what happens is
  • 00:14:26
    we end up with a bunch of measures of
  • 00:14:28
    signal
  • 00:14:30
    that now are each assigned to a specific
  • 00:14:33
    frequency okay so from a series of
  • 00:14:36
    samples acquired over time the for a
  • 00:14:38
    transform can tell us what those
  • 00:14:41
    component frequencies are right each of
  • 00:14:44
    these is unique frequency and can put
  • 00:14:47
    the correct amount of the signal
  • 00:14:49
    amplitude with each of those component
  • 00:14:52
    frequencies now realize that if we took
  • 00:14:55
    all of these components and added them
  • 00:14:59
    all up right that's our reverse for
  • 00:15:02
    transform we would get the composite
  • 00:15:04
    signal that we sampled in the first
  • 00:15:06
    place all right so this allows us to
  • 00:15:10
    accurately localize the signal along
  • 00:15:13
    this frequency encoding Direction in one
  • 00:15:15
    plane only well I don't know what you
  • 00:15:18
    mean by plane the image is a slab okay
  • 00:15:21
    the signal can only be coming from the
  • 00:15:23
    slice so I think what you mean to say is
  • 00:15:25
    that along one dimension of the image
  • 00:15:28
    right and at any given Dimension we have
  • 00:15:32
    an ability
  • 00:15:33
    to know that the signal is coming from
  • 00:15:37
    here in terms of left to right but we
  • 00:15:39
    have no way of knowing where that amount
  • 00:15:42
    of signal that comes at this point in
  • 00:15:44
    the left to right Dimension where it
  • 00:15:46
    comes from in the top to bottom
  • 00:15:48
    Dimension and that's what phase encoding
  • 00:15:50
    is going to give us okay so at this
  • 00:15:53
    point in
  • 00:15:54
    time that's all we've got is this
  • 00:15:57
    one-dimensional information what going
  • 00:15:59
    on from left to right okay okay does it
  • 00:16:03
    ever happen that your for
  • 00:16:05
    transformation just isn't working
  • 00:16:07
    properly how would you
  • 00:16:10
    know um what if it
  • 00:16:13
    like what if it give you totally bunked
  • 00:16:16
    material then what I mean how would you
  • 00:16:17
    know well it depends on what you mean
  • 00:16:20
    okay so first of all there can be
  • 00:16:22
    problems with the there can be problems
  • 00:16:24
    with the fora transform or with the
  • 00:16:26
    Reconstruction algorithms they can cause
  • 00:16:29
    artifacts in the image okay oh that's or
  • 00:16:33
    there could be errors in the data which
  • 00:16:35
    because of the nature of the way they
  • 00:16:37
    interact with the fora transform show up
  • 00:16:39
    as artifacts in the image and we'll show
  • 00:16:42
    you some of those when we talk about
  • 00:16:44
    artifacts tomorrow or Thursday I don't
  • 00:16:46
    remember which one um so but in terms of
  • 00:16:51
    so for example you're not going to have
  • 00:16:53
    the for you transform mess up and give
  • 00:16:54
    you like an image of a chipmunk instead
  • 00:16:56
    of an image of a child if that's what
  • 00:16:59
    you mean it's not going to it's not
  • 00:17:00
    going to totally know what if it messes
  • 00:17:03
    up and it gives you like the right side
  • 00:17:04
    towards the left or like you know
  • 00:17:10
    um yeah I mean those things are I I
  • 00:17:13
    wouldn't say that that's impos I mean
  • 00:17:15
    this right left issue is is an important
  • 00:17:19
    issue that uh is is addressed and dealt
  • 00:17:22
    with and in the image processing
  • 00:17:24
    algorithms that are used on most
  • 00:17:25
    commercial scanners I can tell you for
  • 00:17:27
    an as an example there are all kinds of
  • 00:17:29
    problems sometimes when you work with
  • 00:17:31
    research systems that the images can be
  • 00:17:34
    flipped right to left if you're not
  • 00:17:37
    careful and you don't know exactly
  • 00:17:38
    what's going on so it's it's not totally
  • 00:17:42
    a non-c concern but but pretty much the
  • 00:17:45
    the math does does
  • 00:17:48
    work PE you had a so um are we Imaging
  • 00:17:53
    the same slab at different times or are
  • 00:17:55
    we Imaging different slabs at different
  • 00:17:57
    times and if Imaging the same slab at
  • 00:18:01
    different times just is it at multiple
  • 00:18:03
    TVs what do you mean by the same
  • 00:18:06
    slab I guess so that CU right now just
  • 00:18:08
    so we're all on the same page we excited
  • 00:18:11
    a slice once only one time and then we
  • 00:18:15
    sample the signal several times after
  • 00:18:18
    that single excitation that's all we're
  • 00:18:21
    doing here is that what you're referring
  • 00:18:23
    to I think so are you into phase
  • 00:18:26
    encoding we're going to repeat this and
  • 00:18:27
    do it again and again why can't it just
  • 00:18:30
    uh like I guess I just don't understand
  • 00:18:33
    if we're Imaging the entire slab why why
  • 00:18:35
    does it need to be imaged what do you
  • 00:18:36
    mean by the slab or I guess the the
  • 00:18:38
    slice
  • 00:18:39
    SCE why why do why do we need to sample
  • 00:18:42
    it at multiple times is it to get the
  • 00:18:44
    multiple lines of why do we need
  • 00:18:47
    multiple samples here yeah okay well we
  • 00:18:50
    need multiple samples because the nature
  • 00:18:52
    of the for
  • 00:18:53
    transform the nature of the digital for
  • 00:18:56
    transform that we're looking that we're
  • 00:18:57
    using is that you must provide it a
  • 00:19:01
    sample of the signal for each component
  • 00:19:04
    you want it to
  • 00:19:06
    deliver okay so it has multiple Parts in
  • 00:19:08
    the beginning it puts it all together
  • 00:19:09
    and then before you transform decomposes
  • 00:19:12
    it into its individual Parts exactly
  • 00:19:14
    okay and the more information you give
  • 00:19:16
    it the better able it is to but how does
  • 00:19:18
    how does the the um composite of these
  • 00:19:21
    waves from time one time two differ
  • 00:19:24
    aren't they aren't they the same but
  • 00:19:25
    aren't you getting the same it's the
  • 00:19:27
    same signal all along sure it is you're
  • 00:19:29
    just sampling it multiple times so
  • 00:19:31
    you're giving like
  • 00:19:33
    256 same signals to this well they're
  • 00:19:36
    not the same because this signal is
  • 00:19:38
    varying with
  • 00:19:39
    time okay okay this is a sine wave so
  • 00:19:42
    let's say just in a in the abstract if I
  • 00:19:46
    have this sine wave okay let's say it's
  • 00:19:49
    playing on an
  • 00:19:51
    oscilloscope
  • 00:19:53
    and it's playing on an oscilloscope as
  • 00:19:55
    just a DOT marching across the screen so
  • 00:20:00
    if you come in with your digital camera
  • 00:20:01
    and you snap one
  • 00:20:03
    picture you're only going to capture
  • 00:20:05
    what was happening at that one point in
  • 00:20:07
    time you would need multiple samples in
  • 00:20:10
    order to be able to recreate
  • 00:20:13
    this continuous function is that for
  • 00:20:16
    dynamic Imaging or that's for static
  • 00:20:18
    Imaging no this is the signal this has
  • 00:20:20
    nothing to do with this is static
  • 00:20:22
    Imaging because the nature of things is
  • 00:20:25
    remember this is the transverse
  • 00:20:27
    magnetization inducing a voltage in your
  • 00:20:29
    receiver coil so you put the
  • 00:20:32
    magnetization starts at rest you tip at
  • 00:20:34
    90° and now it is precessing in this
  • 00:20:36
    transverse plane and there's a loop of
  • 00:20:39
    wire over here each time this goes past
  • 00:20:42
    it induces a voltage across that
  • 00:20:44
    conductor and as it moves away that
  • 00:20:47
    voltage declines to zero and then it
  • 00:20:50
    becomes negative and when this comes all
  • 00:20:52
    the way back around it becomes positive
  • 00:20:54
    again this is the magnetization pressing
  • 00:20:57
    at 64 m million times a
  • 00:21:00
    second okay so that's just the nature of
  • 00:21:02
    the Mr signal yes I'm just not sure how
  • 00:21:04
    you derive location based on the
  • 00:21:06
    frequency of components okay that's
  • 00:21:08
    because we turned on this gradient
  • 00:21:10
    magnetic field which meant that the
  • 00:21:13
    field strength is
  • 00:21:16
    changing from point to point in a linear
  • 00:21:19
    fashion lower so first of all just go
  • 00:21:24
    back to this frequency is determined by
  • 00:21:29
    the net magnetic field strength in the
  • 00:21:31
    absence of this gradient magnetic field
  • 00:21:34
    everything
  • 00:21:35
    sees be not and therefore everything
  • 00:21:39
    processes at the same frequency as soon
  • 00:21:41
    as we turn on this gradient magnetic
  • 00:21:43
    field there is an incremental change in
  • 00:21:47
    field strength in B net therefore
  • 00:21:50
    there's an incremental change in
  • 00:21:51
    frequency so when the 4 transform spits
  • 00:21:54
    out a series of frequencies we go back
  • 00:21:57
    and we say okay well we know the way
  • 00:21:59
    that this gradient was applied and
  • 00:22:01
    therefore we can predict the linear
  • 00:22:03
    manner in which the frequency should
  • 00:22:04
    have lined up and we can put the signal
  • 00:22:06
    in the right place is that so it's not
  • 00:22:09
    it's not spitting out let's say the
  • 00:22:10
    frequencies in the correct
  • 00:22:13
    order well it's it's a list of
  • 00:22:16
    frequencies so
  • 00:22:19
    yeah yeah I mean how how you order them
  • 00:22:22
    is up to you it's it's determining what
  • 00:22:24
    the components are and then we need to
  • 00:22:26
    we can place them in order of ascending
  • 00:22:29
    frequency based on the way the gradient
  • 00:22:31
    was
  • 00:22:33
    applied
  • 00:22:37
    okay so any other questions at this
  • 00:22:39
    point about frequency
  • 00:22:41
    encoding so this is so is everyone
  • 00:22:44
    comfortable with localizing this signal
  • 00:22:47
    across at least this one dimension of
  • 00:22:48
    the image yes
  • 00:22:52
    no feel free to shake your head
  • 00:22:56
    no okay so now the next
  • 00:23:01
    step we said is that if we've already
  • 00:23:04
    been able to know right how much signal
  • 00:23:08
    comes at each location in this example
  • 00:23:12
    left to right so we're already finished
  • 00:23:14
    with that
  • 00:23:17
    part how is it that we are going to be
  • 00:23:20
    able
  • 00:23:21
    to tell the location of the signal going
  • 00:23:25
    in the next Direction
  • 00:23:28
    right and this was where we added a bit
  • 00:23:32
    more
  • 00:23:33
    complexity right we had started out
  • 00:23:35
    before with generating the signal okay
  • 00:23:39
    then at some point down here sampling
  • 00:23:42
    that signal in the presence of that
  • 00:23:44
    frequency en code and
  • 00:23:47
    gradients now it turns out actually
  • 00:24:01
    so for those of you that may have
  • 00:24:05
    noticed this would be the same right
  • 00:24:10
    as
  • 00:24:14
    acquiring a line of
  • 00:24:17
    data with a zero amplitude of the phase
  • 00:24:21
    encoding
  • 00:24:22
    gradient So based on our discussion of
  • 00:24:25
    kpace the signal that we acquire under
  • 00:24:28
    this this condition would be written
  • 00:24:30
    into
  • 00:24:32
    the center of kpace is that clear why
  • 00:24:36
    that would be remember the highest
  • 00:24:38
    amplitude is in the center so in this
  • 00:24:40
    example notice it's missing there's no
  • 00:24:42
    phase encoding gradient
  • 00:24:45
    here okay now if we change
  • 00:24:49
    things
  • 00:24:50
    and do this
  • 00:24:53
    again with our phase encoding gradient
  • 00:24:56
    turned on at some ampl
  • 00:24:59
    ude we will so we've acquired right
  • 00:25:02
    multiple
  • 00:25:04
    samples and then we go back to the
  • 00:25:06
    beginning and do this entire thing all
  • 00:25:08
    over again everything exactly the same
  • 00:25:11
    with one
  • 00:25:12
    exception that exception is this phase
  • 00:25:14
    encoding gradient and we once again
  • 00:25:17
    acquire right multiple
  • 00:25:20
    samples and we write those
  • 00:25:23
    into let's say our next line in kpace
  • 00:25:29
    now how does this allow us to determine
  • 00:25:34
    how the signal should be distributed
  • 00:25:35
    from top to bottom we know
  • 00:25:39
    that in this
  • 00:25:49
    case so this is time from left to right
  • 00:25:52
    this is just the raw signal that we just
  • 00:25:54
    acquired
  • 00:25:56
    okay this direction
  • 00:25:59
    is
  • 00:26:02
    the right the phase encoding step right
  • 00:26:05
    it's just the incremental application of
  • 00:26:07
    that
  • 00:26:08
    gradient so we know based on what we
  • 00:26:10
    just discussed a minute ago that we can
  • 00:26:12
    for a transform each of these lines
  • 00:26:15
    independently and generate something
  • 00:26:17
    that looks like this
  • 00:26:31
    right the difference here is that this
  • 00:26:34
    is now
  • 00:26:36
    frequency and this is Phase encoding
  • 00:26:41
    steps is everyone clear about this is
  • 00:26:43
    exactly what we just did a minute
  • 00:26:48
    ago so now if we pick any location left
  • 00:26:53
    to right over here
  • 00:27:00
    wherever it happens to
  • 00:27:02
    be if we pick that location left to
  • 00:27:06
    right whether we choose the signal
  • 00:27:09
    that's on the black line or the signal
  • 00:27:10
    that's on the tan line they both come
  • 00:27:13
    from the
  • 00:27:14
    same location in our
  • 00:27:19
    image which would
  • 00:27:22
    be this will be the image
  • 00:27:29
    all right which will be at this Left
  • 00:27:32
    Right
  • 00:27:37
    location oh
  • 00:27:43
    okay all right so both of those signals
  • 00:27:46
    come from this Left Right location they
  • 00:27:49
    also the signal whether it's the black
  • 00:27:52
    one or the tan one each represents
  • 00:27:54
    signal coming from the entire strip of
  • 00:27:58
    tissue in our image from top to
  • 00:28:01
    bottom and we have no way of telling how
  • 00:28:04
    much of that black signal there comes
  • 00:28:07
    from the middle or the bottom or the top
  • 00:28:08
    and likewise with the tan
  • 00:28:11
    signal
  • 00:28:13
    however right because these two gradient
  • 00:28:16
    magnetic fields that were applied during
  • 00:28:20
    acquisition of each of these signal are
  • 00:28:21
    different
  • 00:28:23
    amplitudes
  • 00:28:25
    right the component
  • 00:28:28
    right components of this let's say black
  • 00:28:31
    signal all come from someplace along
  • 00:28:34
    this
  • 00:28:36
    line we don't know exactly where but we
  • 00:28:40
    do
  • 00:28:41
    know that wherever they are when we turn
  • 00:28:45
    on this extra gradient magnetic field
  • 00:28:49
    that it causes those spins to excelerate
  • 00:28:52
    or decelerate a little bit and therefore
  • 00:28:55
    change their phase with respect to other
  • 00:28:57
    adjacent and Spins and we know that the
  • 00:29:00
    stronger the applied gradient magnetic
  • 00:29:03
    field the greater the amount of phase
  • 00:29:05
    change that's going to
  • 00:29:07
    occur
  • 00:29:10
    okay not only that but if we then go
  • 00:29:17
    back and look at what's
  • 00:29:21
    happening right along that this would be
  • 00:29:24
    that top to bottom dimension in our
  • 00:29:26
    image is left to right in this graph is
  • 00:29:29
    that clear what I mean by
  • 00:29:31
    that right no yes no let me let me draw
  • 00:29:35
    it again to make it clear okay this top
  • 00:29:39
    to bottom dimension in the image is the
  • 00:29:41
    phase encoding
  • 00:29:43
    Direction
  • 00:29:46
    so all I'm doing
  • 00:29:50
    is actually know what let's do this
  • 00:30:02
    okay so this is the phase encoding
  • 00:30:06
    Direction so if we want
  • 00:30:09
    to look at what is
  • 00:30:12
    happening in terms of location in the
  • 00:30:16
    image under each of those gradient
  • 00:30:19
    magnetic
  • 00:30:20
    fields so what we can
  • 00:30:25
    do is draw a graph here
  • 00:30:33
    where this
  • 00:30:35
    is right the actual spatial dimension of
  • 00:30:38
    our
  • 00:30:39
    image this is the gradient
  • 00:30:43
    strength does this make sense I've
  • 00:30:46
    turned this sideways so it parallels the
  • 00:30:48
    image that that's all I'm doing okay so
  • 00:30:52
    what happens is that at some point along
  • 00:30:55
    here is the isocenter of the image
  • 00:30:58
    and at some point along here is the zero
  • 00:31:01
    strength of the gradient magnetic
  • 00:31:04
    field so when we plot what is going
  • 00:31:08
    on with that gradient the black line
  • 00:31:12
    Looks like
  • 00:31:14
    this okay all that means is that no
  • 00:31:17
    matter where we are along this dimension
  • 00:31:19
    of the image we see Zero gradient
  • 00:31:22
    strength guess I should maybe I should
  • 00:31:24
    have done that in Black huh
  • 00:31:34
    whereas the tan
  • 00:31:39
    line Looks something like that where you
  • 00:31:43
    are along this dimension of the image
  • 00:31:46
    there is going depending on where you
  • 00:31:47
    are there is going to be a different
  • 00:31:48
    amount of gradient
  • 00:31:50
    strength okay the zero gradient doesn't
  • 00:31:53
    cause any def
  • 00:31:55
    phasing the one represented by the tan
  • 00:31:59
    line does cause some incremental amount
  • 00:32:01
    of Def
  • 00:32:02
    phasing if we make a comparison between
  • 00:32:06
    the amount of Def phasing that occurs
  • 00:32:09
    when we acquire a signal under the black
  • 00:32:13
    gradient and compare that to the amount
  • 00:32:16
    of Def phasing that occurs under the tan
  • 00:32:19
    gradient you can see that the amount of
  • 00:32:22
    change in gradient strength grows as you
  • 00:32:26
    get farther away from the ISO center of
  • 00:32:28
    the magnet so if you're the component of
  • 00:32:32
    this signal that's sitting right at the
  • 00:32:34
    isocenter it's right in the middle of
  • 00:32:36
    the image right over here right whether
  • 00:32:40
    we have this extra gradient on or not
  • 00:32:42
    it's all the same thing there's no net
  • 00:32:45
    amount of Def phasing all right if
  • 00:32:47
    you're farther away from the isocenter
  • 00:32:49
    and as you get increasingly farther away
  • 00:32:52
    then the amount of change in phase and
  • 00:32:55
    therefore as we heard before change in
  • 00:32:57
    actual signal intensity is going to
  • 00:33:00
    grow so we now have collected these two
  • 00:33:04
    signals each with a different amount of
  • 00:33:09
    phase information conferred on the
  • 00:33:13
    signal and if we now make a comparison
  • 00:33:16
    between phase at this location and this
  • 00:33:20
    location right that is going to vary
  • 00:33:23
    depending on location along this
  • 00:33:26
    dimension in the image if we have enough
  • 00:33:32
    samples right each of
  • 00:33:35
    these right acquired at a
  • 00:33:38
    different gradient
  • 00:33:41
    strength we can take all of those
  • 00:33:44
    samples and using the 4A transform we
  • 00:33:48
    can
  • 00:33:49
    derive right how much signal amplitude
  • 00:33:53
    belongs to small amounts of phase change
  • 00:33:56
    and how much signal amplitude belongs to
  • 00:33:59
    large amounts of phase change those
  • 00:34:01
    small amounts of phase change correlate
  • 00:34:03
    with close to the iso Center and large
  • 00:34:06
    amounts of phase change correlate with
  • 00:34:08
    far from the isocenter and they line up
  • 00:34:11
    in a linear pattern so by having
  • 00:34:14
    multiple samples here we essentially
  • 00:34:16
    then just ask the
  • 00:34:20
    question we say if we for you transform
  • 00:34:23
    in this
  • 00:34:25
    direction what we are looking for now
  • 00:34:27
    instead of a series of frequencies and
  • 00:34:31
    how much amplitude goes with those
  • 00:34:33
    frequencies we are looking for a series
  • 00:34:36
    of amounts of phase change or you could
  • 00:34:39
    think it of it almost as rates of change
  • 00:34:42
    of phase when you're farther from
  • 00:34:44
    isocenter phase is changing more rapidly
  • 00:34:47
    from one gradient to the next when
  • 00:34:50
    you're close to isocenter phase is
  • 00:34:52
    changing more slowly from one gradient
  • 00:34:54
    to the next that rate of change of phase
  • 00:34:56
    essentially is a velocity or a frequency
  • 00:34:58
    it's the same type of information that
  • 00:35:01
    you would extract from the 4 transform
  • 00:35:04
    explicitly at
  • 00:35:05
    frequency so the for transform will give
  • 00:35:08
    us a list of pieces of signal
  • 00:35:11
    amplitude each of them assigned to some
  • 00:35:15
    Delta phase and that allows us to
  • 00:35:19
    localize our signal in this third
  • 00:35:24
    dimension is that clearer
  • 00:35:28
    yes
  • 00:35:29
    no questions about
  • 00:35:35
    this not good when there are no
  • 00:35:37
    questions why can't they just turn on
  • 00:35:39
    both those gradient the frequency and
  • 00:35:41
    the phase encoding gradient at the same
  • 00:35:43
    time just do it in one shot okay why
  • 00:35:48
    not that wasn't a rhetorical
  • 00:35:51
    question but you know the answer well
  • 00:35:54
    why
  • 00:35:55
    not maybe you're right why can't you do
  • 00:36:02
    that oh they add up together so that's
  • 00:36:05
    one issue first of all if they're on at
  • 00:36:06
    the same time you essentially have a
  • 00:36:09
    single oblique gradient magnetic field
  • 00:36:12
    okay well that's one issue but there's
  • 00:36:15
    another reason why it's a
  • 00:36:20
    problem when would you turn them
  • 00:36:25
    on well you said you would turn both on
  • 00:36:28
    at the same time oh you have to pulse it
  • 00:36:31
    with the with the B1 or with the RF or
  • 00:36:36
    whatever what you need is multiple
  • 00:36:41
    samples okay if you're going to use the
  • 00:36:43
    fora
  • 00:36:45
    transform to generate your result you
  • 00:36:49
    need to provide it with multiple
  • 00:36:52
    samples so when we're sampling the
  • 00:36:55
    signal using the frequency encoding
  • 00:36:57
    gradient we have the opportunity to
  • 00:36:59
    acquire multiple samples of that signal
  • 00:37:02
    over
  • 00:37:03
    time all right but where do the multiple
  • 00:37:07
    samples come from with the phase
  • 00:37:08
    encoding
  • 00:37:10
    gradient see if we just turned it on
  • 00:37:13
    over here it would essentially just be
  • 00:37:15
    frequency encoding along a compound
  • 00:37:18
    oblique but the other issue is that we
  • 00:37:20
    need to have multiple the reason why we
  • 00:37:22
    have to iterate this again and again and
  • 00:37:24
    again is be because we need multiple
  • 00:37:27
    discret
  • 00:37:29
    samples that have this phase information
  • 00:37:32
    in them and the way it's set up now
  • 00:37:35
    since we're already doing our sampling
  • 00:37:37
    on the frequency encoding Direction
  • 00:37:38
    during signal
  • 00:37:40
    acquisition we essentially have to
  • 00:37:43
    encode that entire signal exactly the
  • 00:37:45
    same way so it's only one sample as far
  • 00:37:49
    as phase encoding goes and that's the
  • 00:37:51
    reason we have to go back and do this
  • 00:37:52
    again because we need to have these
  • 00:37:55
    multiple discret samples there really
  • 00:37:57
    there's no way around having to do this
  • 00:38:00
    again and again so for each time to
  • 00:38:02
    repetition we're doing all of these
  • 00:38:05
    frequency en coding and then we're going
  • 00:38:07
    back and doing all the phase encoding no
  • 00:38:10
    for each repetition this is what we're
  • 00:38:12
    doing so each repetition contains both
  • 00:38:16
    phase encoding and frequency encoding
  • 00:38:20
    but in sequence not in parallel okay
  • 00:38:24
    okay so each time we repeat this we are
  • 00:38:29
    frequency encoding because we need our
  • 00:38:31
    signal always to be encoded in both
  • 00:38:34
    directions if we only encoded it once in
  • 00:38:37
    One Direction then we did everything
  • 00:38:39
    again encoding it in the other direction
  • 00:38:41
    then we would never be able to put the
  • 00:38:43
    two pieces of information together so
  • 00:38:45
    every line that we fill up here is
  • 00:38:48
    encoded both in the frequency and phase
  • 00:38:51
    directions right just in the frequency
  • 00:38:54
    Direction it's encoded in its entirety
  • 00:38:59
    every time we sample
  • 00:39:01
    it so we have our multiple samples
  • 00:39:05
    acquired every time we fill in one row
  • 00:39:07
    of kpace but when we fill in a single
  • 00:39:10
    row of kpace all we have is a single
  • 00:39:16
    sample as far as phase encoding is
  • 00:39:19
    concerned so when we repeat this again
  • 00:39:22
    we change the phase encoding gradient in
  • 00:39:25
    order to acquire another sample with
  • 00:39:28
    respect to phase encoding our frequency
  • 00:39:31
    encoding stays exactly the
  • 00:39:34
    same
  • 00:39:36
    yes I have a question on the pH anding
  • 00:39:40
    it's represented Cas so I think I
  • 00:39:43
    understand this like the central signal
  • 00:39:46
    intensity with regards to time why you
  • 00:39:48
    have a peak of the sple but don't
  • 00:39:51
    understand why you have a central
  • 00:39:54
    intensity pH and Direction okay so if
  • 00:39:58
    I'm turning on a phase encoding gradient
  • 00:40:00
    anytime I do that at any amplitude it
  • 00:40:04
    will mean that adjacent
  • 00:40:07
    spins or non-adjacent spins for that
  • 00:40:09
    matter will see different amounts of
  • 00:40:11
    gradient strength and therefore we'll
  • 00:40:13
    process at different frequencies and
  • 00:40:14
    we'll def phase that def phasing means
  • 00:40:17
    there's less trans net transverse
  • 00:40:20
    magnetization and less
  • 00:40:21
    signal okay if the gradient magnetic
  • 00:40:24
    field is stronger
  • 00:40:27
    the difference in processional frequency
  • 00:40:30
    between those two spins will be greater
  • 00:40:33
    because they're seeing a greater
  • 00:40:34
    difference in net field strength so
  • 00:40:36
    there will be a greater amount of Def
  • 00:40:38
    phasing so the steeper the gradient the
  • 00:40:41
    greater amount of Def phasing and
  • 00:40:42
    therefore the less
  • 00:40:45
    signal amplitude that is
  • 00:40:48
    lost so each of these rows in kpace is
  • 00:40:52
    acquired under a unique strength or
  • 00:40:54
    slope of that phase encoding gradient is
  • 00:40:57
    it it gradually increasing so it's
  • 00:40:59
    incremented and it is laid out so that
  • 00:41:02
    the weakest gradients are in the center
  • 00:41:05
    and the strongest are at the periphery
  • 00:41:08
    yes now it might be reordered
  • 00:41:10
    differently in some special applications
  • 00:41:13
    but as far as we're concerned at this
  • 00:41:14
    point they are incrementally ordered so
  • 00:41:17
    that the weakest gradients are at the
  • 00:41:19
    center and the strongest gradients are
  • 00:41:22
    placed at the peradi you have less phase
  • 00:41:25
    less def phasing def phasing
  • 00:41:29
    yes
  • 00:41:31
    mhm okay
Tags
  • MRI
  • k-space
  • localization
  • frequency encoding
  • phase encoding
  • Fourier transform
  • gradient strength
  • image quality
  • slice selection
  • signal amplitude